Index
A
|
B
|
C
|
D
|
E
|
F
|
G
|
I
|
L
|
M
|
N
|
O
|
P
|
Q
|
R
|
S
|
T
|
V
|
Z
A
agreeing_skeletons() (in module imagepipe.raw_functions)
average_qualifying_value_per_region() (in module imagepipe.raw_functions)
B
better2D_desisty_plot() (in module imagepipe.density_plot)
binarize_2d() (in module imagepipe.raw_functions)
binarize_3d() (in module imagepipe.raw_functions)
C
classify_fragmentation_for_mitochondria() (in module imagepipe.raw_functions)
clear_based_on_2d_mask() (in module imagepipe.raw_functions)
color_based_traversal() (in module imagepipe.traversals)
D
detect_upper_outliers() (in module imagepipe.raw_functions)
doublewrap() (in module imagepipe.core_functions)
E
exclude_region() (in module imagepipe.raw_functions)
F
f_2d_stack_2d_filter() (in module imagepipe.raw_functions)
f_3d_stack_2d_filter() (in module imagepipe.raw_functions)
filter_labels() (in module imagepipe.raw_functions)
for_each() (in module imagepipe.core_functions)
G
gamma_stabilize() (in module imagepipe.raw_functions)
generator_wrapper() (in module imagepipe.core_functions)
I
imagepipe (module)
imagepipe.core_functions (module)
imagepipe.density_plot (module)
imagepipe.iterate_and_check_img_files (module)
imagepipe.raw_functions (module)
imagepipe.tools (module)
imagepipe.tools.helpers (module)
imagepipe.traversals (module)
imagepipe.wrapped_functions (module)
improved_watershed() (in module imagepipe.raw_functions)
in_contact() (in module imagepipe.raw_functions)
iterate_and_check_img() (in module imagepipe.iterate_and_check_img_files)
L
label_and_correct() (in module imagepipe.raw_functions)
label_based_aq() (in module imagepipe.raw_functions)
list_not_string() (in module imagepipe.tools.helpers)
locally_normalize() (in module imagepipe.raw_functions)
M
mask_filter_2d() (in module imagepipe.raw_functions)
max_projection() (in module imagepipe.raw_functions)
N
name_channels() (in module imagepipe.traversals)
O
otsu_tresholding() (in module imagepipe.raw_functions)
P
pad_skipping_iterator() (in module imagepipe.core_functions)
paint_from_mask() (in module imagepipe.core_functions)
paint_mask() (in module imagepipe.raw_functions)
PipeArgError
Q
qualifying_gfp() (in module imagepipe.raw_functions)
R
random_walker_binarize() (in module imagepipe.raw_functions)
robust_binarize() (in module imagepipe.raw_functions)
S
safe_dir_create() (in module imagepipe.tools.helpers)
smooth() (in module imagepipe.raw_functions)
smooth_2d() (in module imagepipe.raw_functions)
split_and_trim() (in module imagepipe.raw_functions)
splitter() (in module imagepipe.core_functions)
sum_projection() (in module imagepipe.raw_functions)
T
tiff_stack_2_np_arr() (in module imagepipe.tools.helpers)
tile_from_mask() (in module imagepipe.core_functions)
V
volume_aqvi() (in module imagepipe.raw_functions)
volume_mqvi() (in module imagepipe.raw_functions)
voronoi_segment_labels() (in module imagepipe.raw_functions)
Z
z_stack_based_traversal() (in module imagepipe.traversals)
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